2.6 Organizing groups
Build lists of named group factors for easiness of reference.
First, create a list aiming to define workshops productions, so no shipwrecks:
factor_list <-
  list(
    Site = factor(cleanAmphorae$Site_Name[!isShipwreck]),
    FabricGroup = factor(cleanAmphorae$FabricGroup[!isShipwreck]),
    ChemGroup = factor(cleanAmphorae$ChemReferenceGroup[!isShipwreck]),
    ProvGroup = factor(ProvenanceGroup[!isShipwreck])
  )| Site | FabricGroup | ChemGroup | ProvGroup | |
|---|---|---|---|---|
| ACM001 | Ca L’Arnau-Can Pau Ferrer | ACM-2 | ACM-C | ACM | 
| ACM097 | Ca L’Arnau-Can Pau Ferrer | ACM-1 | ACM-A | ACM | 
| BIF006 | BDN-Pompeu Fabra | BIF-1 | BIF-2 | BIF | 
| BIF048 | BDN-Pompeu Fabra | BIF-1 | BIF-3 | BIF | 
| CRC002 | Cal Ros de les Cabres | CRC-1 | CRC-1 | CRC | 
| ELV002 | El Vilarenc | ELV-1 | ELV-1 | ELV | 
| ELV051 | El Vilarenc | ELV-1 | ELV-2 | ELV | 
| FEU009 | Can Feu | FEU-IND1 | FEU-IND1 | FEU-IND1 | 
| LLA010 | Llafranc | LLA-1 | LLA-A2 | LLA | 
| MOR018 | El More | MOR-2 | MOR-3 | MOR | 
| SAL025 | La Salut | SAL-2 | SAL-1 | SAL | 
| SBL045 | Sant Boi Historic Centre | SBL-2 | SBL-2 | SBL | 
Then, create a second list, aiming to assign shipwreck observations to workshop productions, so with shipwreck samples but no true outliers:
factor_list_Shipwreck <-
  list(
    Site = factor(cleanAmphorae$Site_Name[!isTrueIND]),
    FabricGroup = factor(cleanAmphorae$FabricGroup[!isTrueIND]),
    ChemGroup = factor(cleanAmphorae$ChemReferenceGroup[!isTrueIND]),
    ProvGroup = factor(ProvenanceGroup[!isTrueIND])
  )